PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00568.1.p
Common NameLOC105951028, MIMGU_mgv1a008008mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 389aa    MW: 42870 Da    PI: 6.6808
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00568.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.1e-12321366655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  Migut.D00568.1.p 321 SIAERVRRTKISERMRKLQELVPNM----EKQTNTSDMLDLAVDYIKDLQ 366
                       689*********************6....4679****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.71E-16314379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.97315365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-11319370No hitNo description
Gene3DG3DSA:4.10.280.109.2E-15319378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12321371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-9321366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MNSNHNNQQQ QQQNMQAAGA GLTRYRSAPS SYFANLLNTP AGADGGFGGA GDFEELFNEA  60
RASSPETQRI FSRFMSNSDD SVRESSSPCV MTDLPSPSPL NPQFYPPTKA EPEFEQRLQR  120
QRSNDYSEPV HSSAMDGEYN RVLGSFSSSH VAHMKIERAG AGGGSGLIRH SSSPPGLFAN  180
INIDNEFGTM RTFGSGNTNN NNAEASISSS SRFKNQMDSI DEIENKGIGE NNSSDYITGF  240
PMNAWDDDFL NELADNDNKR FSNNANDQSN EGGNNRPTNR LSHHLSMPTS SAELSAMEKL  300
LQDSVPCKIR AKRGHATHPR SIAERVRRTK ISERMRKLQE LVPNMEKQTN TSDMLDLAVD  360
YIKDLQRQVK TLSDNRAKCS CSAKHKPS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829876.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A022S1T50.0A0A022S1T5_ERYGU; Uncharacterized protein
STRINGSolyc12g100140.1.15e-92(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-58bHLH family protein